Coding

Part:BBa_K2546005

Designed by: Tsu-Wang Sun   Group: iGEM18_NCHU_Taichung   (2018-10-09)


2-haloacid dehalogenase plus laccase with promoter and ribosome binding site

This part is the promoter circuit of BBa_K2546002. We add a promoter which is come from BBa_J23100 in front of the HAD+Laccase to let it express. Thus we can test the growth curve with TCDD and without TCDD.


RESULT

First, we transform the BBa_J23100 into E.coli(DH5alpha), to let it amplify the plasmid.

caption

Then we cut BBa_K2546002 with XbaI and PstI, and cut the BBa_J23100 with SpeI and PstI. After ligation and transformation, we got the colony and do the liquid LB incubate in the 37℃ overnight. In the next day, we extract the plasmid and get the result below.

caption

The ideal plasmid is 4560 bp , and the result is match. We also operate PCR to check.

caption

The band is nearly below the 3000bp, which is similar to 2756bp. Eventually, we successful assemble the HL composite part.



the Growth Curve Test


The growing of HAD+TLcc (J23100) got just slightly attenuate by TCDD (Fig. 1B) contrast to the growing of the control J23100 (Fig. 1A).

legends



T--NCHU Taichung--part13.jpeg

Fig.1A

T--NCHU Taichung--part14.png

Fig.1B


Sequence and Features


Assembly Compatibility:
  • 10
    COMPATIBLE WITH RFC[10]
  • 12
    INCOMPATIBLE WITH RFC[12]
    Illegal NheI site found at 7
    Illegal NheI site found at 30
  • 21
    INCOMPATIBLE WITH RFC[21]
    Illegal BglII site found at 745
  • 23
    COMPATIBLE WITH RFC[23]
  • 25
    INCOMPATIBLE WITH RFC[25]
    Illegal NgoMIV site found at 394
    Illegal NgoMIV site found at 491
    Illegal NgoMIV site found at 1216
    Illegal AgeI site found at 734
    Illegal AgeI site found at 1726
    Illegal AgeI site found at 2110
  • 1000
    COMPATIBLE WITH RFC[1000]


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